Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 AC132872.4-202ENST00000622924 2756 ntBASIC14.9□□□□□ -0.02
AP3S2P59780 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.9□□□□□ -0.02
AP3S2P59780 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.9□□□□□ -0.02
AP3S2P59780 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 AC110285.5-201ENST00000611501 352 ntBASIC14.9□□□□□ -0.02
AP3S2P59780 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.9□□□□□ -0.02
AP3S2P59780 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S2P59780 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S2P59780 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S2P59780 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.89□□□□□ -0.03
AP3S2P59780 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.89□□□□□ -0.03
AP3S2P59780 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 AC022517.1-201ENST00000592429 346 ntBASIC14.89□□□□□ -0.03
AP3S2P59780 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 AC092053.1-201ENST00000605787 1936 ntBASIC14.89□□□□□ -0.03
AP3S2P59780 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S2P59780 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S2P59780 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S2P59780 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
AP3S2P59780 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AP3S2P59780 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S2P59780 AC005052.1-201ENST00000625181 2492 ntBASIC14.88□□□□□ -0.03
AP3S2P59780 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S2P59780 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S2P59780 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S2P59780 MFAP1P1-201ENST00000442257 1255 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms