Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VSX2P58304 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
VSX2P58304 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VSX2P58304 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VSX2P58304 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.58■□□□□ 0.25
VSX2P58304 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
VSX2P58304 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.58■□□□□ 0.25
VSX2P58304 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.58■□□□□ 0.24
VSX2P58304 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VSX2P58304 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
VSX2P58304 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.58■□□□□ 0.24
VSX2P58304 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.58■□□□□ 0.24
VSX2P58304 AC092910.1-201ENST00000482027 1129 ntBASIC16.58■□□□□ 0.24
VSX2P58304 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.58■□□□□ 0.24
VSX2P58304 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.58■□□□□ 0.24
VSX2P58304 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.58■□□□□ 0.24
VSX2P58304 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.58■□□□□ 0.24
VSX2P58304 AC006557.2-201ENST00000592985 1240 ntBASIC16.58■□□□□ 0.24
VSX2P58304 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.58■□□□□ 0.24
VSX2P58304 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.58■□□□□ 0.24
VSX2P58304 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VSX2P58304 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VSX2P58304 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
VSX2P58304 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.58■□□□□ 0.24
VSX2P58304 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VSX2P58304 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.57■□□□□ 0.24
VSX2P58304 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 AL135999.2-201ENST00000622438 1686 ntBASIC16.57■□□□□ 0.24
VSX2P58304 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 AP002414.3-201ENST00000589352 1468 ntBASIC16.57■□□□□ 0.24
VSX2P58304 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VSX2P58304 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VSX2P58304 IL9RP2-201ENST00000423948 1312 ntBASIC16.57■□□□□ 0.24
VSX2P58304 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VSX2P58304 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.57■□□□□ 0.24
VSX2P58304 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.57■□□□□ 0.24
VSX2P58304 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.57■□□□□ 0.24
VSX2P58304 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.57■□□□□ 0.24
VSX2P58304 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.57■□□□□ 0.24
VSX2P58304 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.57■□□□□ 0.24
VSX2P58304 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.57■□□□□ 0.24
VSX2P58304 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VSX2P58304 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.56■□□□□ 0.24
VSX2P58304 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VSX2P58304 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.56■□□□□ 0.24
VSX2P58304 LINC00982-205ENST00000420957 435 ntBASIC16.56■□□□□ 0.24
VSX2P58304 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.56■□□□□ 0.24
VSX2P58304 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VSX2P58304 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
VSX2P58304 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.56■□□□□ 0.24
VSX2P58304 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
VSX2P58304 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
VSX2P58304 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.56■□□□□ 0.24
VSX2P58304 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms