Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKN2DP55273 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 MIR5100-201ENST00000579544 119 ntBASIC17.09■□□□□ 0.33
CDKN2DP55273 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKN2DP55273 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKN2DP55273 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKN2DP55273 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKN2DP55273 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKN2DP55273 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.08■□□□□ 0.33
CDKN2DP55273 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKN2DP55273 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKN2DP55273 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKN2DP55273 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDKN2DP55273 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKN2DP55273 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 SPDYE21P-201ENST00000413323 827 ntBASIC17.08■□□□□ 0.32
CDKN2DP55273 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKN2DP55273 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.08■□□□□ 0.32
CDKN2DP55273 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.08■□□□□ 0.32
CDKN2DP55273 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.08■□□□□ 0.32
CDKN2DP55273 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CDKN2DP55273 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CDKN2DP55273 AC124067.4-201ENST00000519691 2379 ntBASIC17.08■□□□□ 0.32
CDKN2DP55273 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKN2DP55273 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKN2DP55273 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 RNF216P1-203ENST00000404404 2427 ntBASIC17.07■□□□□ 0.32
CDKN2DP55273 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.07■□□□□ 0.32
CDKN2DP55273 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDKN2DP55273 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 NUS1P1-201ENST00000446295 882 ntBASIC17.07■□□□□ 0.32
CDKN2DP55273 AC124947.2-201ENST00000547118 1133 ntBASIC17.07■□□□□ 0.32
CDKN2DP55273 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.07■□□□□ 0.32
CDKN2DP55273 AC138894.3-201ENST00000603787 634 ntBASIC17.07■□□□□ 0.32
CDKN2DP55273 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CDKN2DP55273 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CDKN2DP55273 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKN2DP55273 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN2DP55273 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKN2DP55273 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms