Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NCKAP1LP55160 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NCKAP1LP55160 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 PAWRP1-201ENST00000451083 565 ntBASIC18.89■□□□□ 0.61
NCKAP1LP55160 AC079776.4-201ENST00000511039 504 ntBASIC18.89■□□□□ 0.61
NCKAP1LP55160 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 AC008667.4-201ENST00000607370 168 ntBASIC18.89■□□□□ 0.61
NCKAP1LP55160 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKAP1LP55160 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKAP1LP55160 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 IGHV3-65-201ENST00000523210 341 ntBASIC18.88■□□□□ 0.61
NCKAP1LP55160 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 AC005593.1-201ENST00000624894 515 ntBASIC18.88■□□□□ 0.61
NCKAP1LP55160 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NCKAP1LP55160 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKAP1LP55160 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 IL9RP2-201ENST00000423948 1312 ntBASIC18.87■□□□□ 0.61
NCKAP1LP55160 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 FRMD8P1-201ENST00000440433 1524 ntBASIC18.87■□□□□ 0.61
NCKAP1LP55160 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 AC124947.2-201ENST00000547118 1133 ntBASIC18.87■□□□□ 0.61
NCKAP1LP55160 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NCKAP1LP55160 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms