Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC090340.1-201ENST00000620778 4980 ntBASIC16.63■□□□□ 0.25
EPHA4P54764 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EPHA4P54764 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA4P54764 RHOQP3-201ENST00000437982 621 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA4P54764 PAWRP1-201ENST00000451083 565 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHA4P54764 AC018845.2-201ENST00000568326 409 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.62■□□□□ 0.25
EPHA4P54764 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 AL691403.2-201ENST00000618460 490 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 AC010507.1-201ENST00000633895 436 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 AC079781.4-201ENST00000641908 219 ntBASIC16.62■□□□□ 0.25
EPHA4P54764 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EPHA4P54764 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
EPHA4P54764 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EPHA4P54764 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA4P54764 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHA4P54764 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
EPHA4P54764 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EPHA4P54764 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHA4P54764 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHA4P54764 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHA4P54764 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.61■□□□□ 0.25
EPHA4P54764 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
EPHA4P54764 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
EPHA4P54764 AC007064.4-201ENST00000637740 555 ntBASIC16.61■□□□□ 0.25
EPHA4P54764 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 HTR7P1-202ENST00000624664 4411 ntBASIC16.61■□□□□ 0.25
EPHA4P54764 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHA4P54764 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHA4P54764 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA4P54764 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
EPHA4P54764 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 AC004967.1-201ENST00000453589 447 ntBASIC16.6■□□□□ 0.25
EPHA4P54764 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHA4P54764 CXCL1P1-201ENST00000502804 216 ntBASIC16.6■□□□□ 0.25
EPHA4P54764 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHA4P54764 PDPK2P-202ENST00000562415 1191 ntBASIC16.6■□□□□ 0.25
EPHA4P54764 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 AC055717.3-201ENST00000622967 595 ntBASIC16.6■□□□□ 0.25
EPHA4P54764 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHA4P54764 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
EPHA4P54764 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms