Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC24.46■■□□□ 1.51
CLTCL1P53675 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 AC016027.1-202ENST00000607927 1699 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC24.46■■□□□ 1.51
CLTCL1P53675 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CLTCL1P53675 KLF2P3-201ENST00000451977 1087 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.46■■□□□ 1.51
CLTCL1P53675 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.46■■□□□ 1.51
CLTCL1P53675 AC092364.2-202ENST00000597012 1073 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC24.46■■□□□ 1.51
CLTCL1P53675 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC24.46■■□□□ 1.51
CLTCL1P53675 FRMD8P1-201ENST00000440433 1524 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
CLTCL1P53675 NARF-206ENST00000457415 1668 ntTSL 5 BASIC24.45■■□□□ 1.5
CLTCL1P53675 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CLTCL1P53675 AC093525.9-201ENST00000624961 1746 ntBASIC24.45■■□□□ 1.5
CLTCL1P53675 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC24.45■■□□□ 1.5
CLTCL1P53675 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.45■■□□□ 1.5
CLTCL1P53675 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.45■■□□□ 1.5
CLTCL1P53675 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.45■■□□□ 1.5
CLTCL1P53675 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.45■■□□□ 1.5
CLTCL1P53675 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.45■■□□□ 1.5
CLTCL1P53675 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.45■■□□□ 1.5
CLTCL1P53675 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC24.45■■□□□ 1.5
CLTCL1P53675 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.45■■□□□ 1.5
CLTCL1P53675 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC24.45■■□□□ 1.5
CLTCL1P53675 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CLTCL1P53675 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLTCL1P53675 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC24.44■■□□□ 1.5
CLTCL1P53675 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC24.44■■□□□ 1.5
CLTCL1P53675 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 GATD1-206ENST00000526325 756 ntTSL 5 BASIC24.44■■□□□ 1.5
CLTCL1P53675 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CLTCL1P53675 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CLTCL1P53675 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC24.44■■□□□ 1.5
CLTCL1P53675 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 BOC-212ENST00000485230 2173 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLTCL1P53675 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC24.44■■□□□ 1.5
CLTCL1P53675 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC24.43■■□□□ 1.5
CLTCL1P53675 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC24.43■■□□□ 1.5
CLTCL1P53675 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 RBPMS2P1-201ENST00000437762 623 ntBASIC24.43■■□□□ 1.5
CLTCL1P53675 AC125807.1-201ENST00000483097 614 ntBASIC24.43■■□□□ 1.5
CLTCL1P53675 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC24.43■■□□□ 1.5
CLTCL1P53675 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 TOP3BP1-201ENST00000420768 1380 ntBASIC24.43■■□□□ 1.5
CLTCL1P53675 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CLTCL1P53675 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.43■■□□□ 1.5
CLTCL1P53675 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 AC026150.2-201ENST00000564693 1156 ntBASIC24.43■■□□□ 1.5
CLTCL1P53675 AP000842.3-202ENST00000569238 1080 ntBASIC24.43■■□□□ 1.5
CLTCL1P53675 NAA60-208ENST00000570819 833 ntTSL 2 BASIC24.43■■□□□ 1.5
CLTCL1P53675 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLTCL1P53675 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CLTCL1P53675 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms