Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI2P48788 AC092919.2-201ENST00000623631 1645 ntBASIC20.48■□□□□ 0.87
TNNI2P48788 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI2P48788 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TNNI2P48788 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TNNI2P48788 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.48■□□□□ 0.87
TNNI2P48788 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI2P48788 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.48■□□□□ 0.87
TNNI2P48788 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.47■□□□□ 0.87
TNNI2P48788 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
TNNI2P48788 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TNNI2P48788 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.47■□□□□ 0.87
TNNI2P48788 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.47■□□□□ 0.87
TNNI2P48788 AC087163.2-201ENST00000457299 853 ntBASIC20.47■□□□□ 0.87
TNNI2P48788 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.47■□□□□ 0.87
TNNI2P48788 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.47■□□□□ 0.87
TNNI2P48788 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNNI2P48788 AC093512.1-201ENST00000617969 520 ntBASIC20.47■□□□□ 0.87
TNNI2P48788 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.47■□□□□ 0.87
TNNI2P48788 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNNI2P48788 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.47■□□□□ 0.87
TNNI2P48788 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TNNI2P48788 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.46■□□□□ 0.87
TNNI2P48788 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 AL390961.4-201ENST00000623958 2535 ntBASIC20.46■□□□□ 0.87
TNNI2P48788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.46■□□□□ 0.87
TNNI2P48788 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.46■□□□□ 0.87
TNNI2P48788 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.46■□□□□ 0.87
TNNI2P48788 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.46■□□□□ 0.87
TNNI2P48788 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.46■□□□□ 0.87
TNNI2P48788 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNNI2P48788 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.46■□□□□ 0.87
TNNI2P48788 AC138028.4-201ENST00000564984 1845 ntBASIC20.46■□□□□ 0.87
TNNI2P48788 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
TNNI2P48788 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TNNI2P48788 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TNNI2P48788 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TNNI2P48788 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.45■□□□□ 0.86
TNNI2P48788 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.45■□□□□ 0.86
TNNI2P48788 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.45■□□□□ 0.86
TNNI2P48788 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.45■□□□□ 0.86
TNNI2P48788 SLC25A6P2-201ENST00000497974 877 ntBASIC20.45■□□□□ 0.86
TNNI2P48788 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 FAM86C2P-203ENST00000528684 1004 ntBASIC20.45■□□□□ 0.86
TNNI2P48788 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.45■□□□□ 0.86
TNNI2P48788 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 LINC00628-201ENST00000628516 1289 ntBASIC20.45■□□□□ 0.86
TNNI2P48788 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.45■□□□□ 0.86
TNNI2P48788 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.45■□□□□ 0.86
TNNI2P48788 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNNI2P48788 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.45■□□□□ 0.86
TNNI2P48788 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNNI2P48788 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNNI2P48788 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms