Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1DP48730 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1DP48730 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1DP48730 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1DP48730 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1DP48730 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CSNK1DP48730 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1DP48730 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CSNK1DP48730 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CSNK1DP48730 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1DP48730 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1DP48730 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1DP48730 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 FRMD8P1-201ENST00000440433 1524 ntBASIC17.28■□□□□ 0.36
CSNK1DP48730 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CSNK1DP48730 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CSNK1DP48730 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CSNK1DP48730 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1DP48730 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 VN2R19P-201ENST00000442399 1052 ntBASIC17.28■□□□□ 0.36
CSNK1DP48730 AC087163.2-201ENST00000457299 853 ntBASIC17.28■□□□□ 0.36
CSNK1DP48730 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 OR7E47P-204ENST00000575924 449 ntBASIC17.28■□□□□ 0.36
CSNK1DP48730 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1DP48730 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1DP48730 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CSNK1DP48730 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 HCG11-201ENST00000411553 5696 ntBASIC17.28■□□□□ 0.36
CSNK1DP48730 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1DP48730 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1DP48730 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1DP48730 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1DP48730 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
CSNK1DP48730 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CSNK1DP48730 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1DP48730 CRYGEP-201ENST00000412192 528 ntBASIC17.27■□□□□ 0.36
CSNK1DP48730 AL591424.1-201ENST00000442569 1213 ntBASIC17.27■□□□□ 0.36
CSNK1DP48730 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1DP48730 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1DP48730 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1DP48730 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.36
CSNK1DP48730 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1DP48730 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1DP48730 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1DP48730 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1DP48730 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1DP48730 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1DP48730 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1DP48730 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1DP48730 AL645608.8-201ENST00000606034 2086 ntBASIC17.26■□□□□ 0.35
CSNK1DP48730 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1DP48730 MIR574-201ENST00000385209 96 ntBASIC17.26■□□□□ 0.35
CSNK1DP48730 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1DP48730 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.26■□□□□ 0.35
CSNK1DP48730 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1DP48730 SLC25A6P2-201ENST00000497974 877 ntBASIC17.26■□□□□ 0.35
CSNK1DP48730 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1DP48730 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1DP48730 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1DP48730 AC027601.4-201ENST00000611259 610 ntBASIC17.26■□□□□ 0.35
CSNK1DP48730 FAM197Y3-203ENST00000618346 717 ntBASIC17.26■□□□□ 0.35
CSNK1DP48730 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1DP48730 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CSNK1DP48730 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1DP48730 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1DP48730 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms