Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6BP35913 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.14■□□□□ 0.98
PDE6BP35913 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6BP35913 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.14■□□□□ 0.97
PDE6BP35913 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6BP35913 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 LINC01451-201ENST00000623792 534 ntBASIC21.14■□□□□ 0.97
PDE6BP35913 AC008267.7-201ENST00000624570 1194 ntBASIC21.14■□□□□ 0.97
PDE6BP35913 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PDE6BP35913 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6BP35913 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDE6BP35913 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6BP35913 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6BP35913 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.13■□□□□ 0.97
PDE6BP35913 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 AC092580.3-201ENST00000430932 139 ntBASIC21.13■□□□□ 0.97
PDE6BP35913 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.13■□□□□ 0.97
PDE6BP35913 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDE6BP35913 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6BP35913 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDE6BP35913 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6BP35913 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE6BP35913 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 AC241585.1-201ENST00000433527 519 ntBASIC21.12■□□□□ 0.97
PDE6BP35913 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE6BP35913 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE6BP35913 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE6BP35913 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.12■□□□□ 0.97
PDE6BP35913 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE6BP35913 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDE6BP35913 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE6BP35913 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6BP35913 GNAS-203ENST00000306120 1878 ntBASIC21.11■□□□□ 0.97
PDE6BP35913 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 MIR346-201ENST00000362234 95 ntBASIC21.11■□□□□ 0.97
PDE6BP35913 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PDE6BP35913 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
PDE6BP35913 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE6BP35913 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE6BP35913 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE6BP35913 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 AP000842.3-202ENST00000569238 1080 ntBASIC21.11■□□□□ 0.97
PDE6BP35913 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6BP35913 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDE6BP35913 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PDE6BP35913 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6BP35913 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms