Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TM4SF1P30408 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 AL353732.1-201ENST00000569618 1459 ntBASIC21.28■■□□□ 1
TM4SF1P30408 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 COX5BP8-201ENST00000416911 349 ntBASIC21.28■■□□□ 1
TM4SF1P30408 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.28■■□□□ 1
TM4SF1P30408 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.28■■□□□ 1
TM4SF1P30408 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 AC027307.3-201ENST00000594262 1100 ntBASIC21.28■■□□□ 1
TM4SF1P30408 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.28■■□□□ 1
TM4SF1P30408 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.28■■□□□ 1
TM4SF1P30408 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.28■■□□□ 1
TM4SF1P30408 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.28■■□□□ 1
TM4SF1P30408 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.27■■□□□ 1
TM4SF1P30408 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.27■■□□□ 1
TM4SF1P30408 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.27■■□□□ 1
TM4SF1P30408 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.27■■□□□ 1
TM4SF1P30408 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.27■■□□□ 1
TM4SF1P30408 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.27■■□□□ 1
TM4SF1P30408 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.27■■□□□ 1
TM4SF1P30408 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.27■■□□□ 1
TM4SF1P30408 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.27■■□□□ 1
TM4SF1P30408 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TM4SF1P30408 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.27■■□□□ 1
TM4SF1P30408 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.27■■□□□ 1
TM4SF1P30408 AC100757.3-201ENST00000622361 1406 ntBASIC21.27■■□□□ 1
TM4SF1P30408 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TM4SF1P30408 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.27■■□□□ 1
TM4SF1P30408 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TM4SF1P30408 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TM4SF1P30408 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TM4SF1P30408 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.27■□□□□ 0.99
TM4SF1P30408 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.27■□□□□ 0.99
TM4SF1P30408 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TM4SF1P30408 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
TM4SF1P30408 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TM4SF1P30408 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.26■□□□□ 0.99
TM4SF1P30408 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.26■□□□□ 0.99
TM4SF1P30408 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.26■□□□□ 0.99
TM4SF1P30408 RNU1-129P-201ENST00000384064 167 ntBASIC21.26■□□□□ 0.99
TM4SF1P30408 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.26■□□□□ 0.99
TM4SF1P30408 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.26■□□□□ 0.99
TM4SF1P30408 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.26■□□□□ 0.99
TM4SF1P30408 AL138918.1-201ENST00000568306 659 ntBASIC21.26■□□□□ 0.99
TM4SF1P30408 U1.21-201ENST00000580816 167 ntBASIC21.26■□□□□ 0.99
TM4SF1P30408 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TM4SF1P30408 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TM4SF1P30408 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TM4SF1P30408 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TM4SF1P30408 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TM4SF1P30408 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.25■□□□□ 0.99
TM4SF1P30408 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.25■□□□□ 0.99
TM4SF1P30408 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.25■□□□□ 0.99
TM4SF1P30408 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF1P30408 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TM4SF1P30408 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TM4SF1P30408 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF1P30408 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF1P30408 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TM4SF1P30408 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TM4SF1P30408 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TM4SF1P30408 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms