Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN3P26045 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN3P26045 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN3P26045 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN3P26045 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTPN3P26045 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN3P26045 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN3P26045 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 TSPY19P-201ENST00000418461 509 ntBASIC17.64■□□□□ 0.41
PTPN3P26045 TSPY18P-201ENST00000441642 509 ntBASIC17.64■□□□□ 0.41
PTPN3P26045 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN3P26045 KRT18P31-201ENST00000506277 1292 ntBASIC17.64■□□□□ 0.41
PTPN3P26045 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN3P26045 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN3P26045 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.64■□□□□ 0.41
PTPN3P26045 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN3P26045 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN3P26045 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN3P26045 AC004817.3-201ENST00000602957 2129 ntBASIC17.63■□□□□ 0.41
PTPN3P26045 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPN3P26045 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPN3P26045 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 AL121772.3-201ENST00000610840 674 ntBASIC17.63■□□□□ 0.41
PTPN3P26045 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN3P26045 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN3P26045 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN3P26045 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PTPN3P26045 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN3P26045 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN3P26045 PRELID1P1-202ENST00000567272 903 ntBASIC17.62■□□□□ 0.41
PTPN3P26045 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN3P26045 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN3P26045 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN3P26045 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN3P26045 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms