Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP24386 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP24386 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP24386 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP24386 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP24386 AC112698.1-201ENST00000510299 916 ntBASIC16.21■□□□□ 0.19
CHMP24386 AC111152.3-201ENST00000569699 673 ntBASIC16.21■□□□□ 0.19
CHMP24386 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP24386 LINC01711-201ENST00000598340 967 ntBASIC16.21■□□□□ 0.19
CHMP24386 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHMP24386 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP24386 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHMP24386 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP24386 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP24386 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP24386 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP24386 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP24386 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.21■□□□□ 0.18
CHMP24386 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP24386 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP24386 NSUN5P1-202ENST00000421140 1535 ntBASIC16.2■□□□□ 0.18
CHMP24386 NSUN5P2-203ENST00000457352 1529 ntBASIC16.2■□□□□ 0.18
CHMP24386 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP24386 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP24386 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHMP24386 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHMP24386 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 POM121L3P-201ENST00000419331 1163 ntBASIC16.2■□□□□ 0.18
CHMP24386 MINOS1P3-201ENST00000457048 203 ntBASIC16.2■□□□□ 0.18
CHMP24386 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP24386 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 AP005901.3-202ENST00000581653 237 ntBASIC16.2■□□□□ 0.18
CHMP24386 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP24386 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CHMP24386 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CHMP24386 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP24386 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP24386 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP24386 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP24386 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHMP24386 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHMP24386 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP24386 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.19■□□□□ 0.18
CHMP24386 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.19■□□□□ 0.18
CHMP24386 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.19■□□□□ 0.18
CHMP24386 AC099336.1-202ENST00000602961 463 ntBASIC16.19■□□□□ 0.18
CHMP24386 NFIC-211ENST00000641145 8399 ntBASIC16.19■□□□□ 0.18
CHMP24386 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHMP24386 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms