Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.48■□□□□ 0.39
CCND1P24385 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.48■□□□□ 0.39
CCND1P24385 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCND1P24385 VENTXP5-201ENST00000523979 775 ntBASIC17.48■□□□□ 0.39
CCND1P24385 AL136038.3-201ENST00000561909 1096 ntBASIC17.48■□□□□ 0.39
CCND1P24385 AL121956.5-201ENST00000625261 221 ntBASIC17.48■□□□□ 0.39
CCND1P24385 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCND1P24385 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.48■□□□□ 0.39
CCND1P24385 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.48■□□□□ 0.39
CCND1P24385 AC005052.1-201ENST00000625181 2492 ntBASIC17.48■□□□□ 0.39
CCND1P24385 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCND1P24385 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.48■□□□□ 0.39
CCND1P24385 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 AC132938.6-201ENST00000623828 1655 ntBASIC17.48■□□□□ 0.39
CCND1P24385 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCND1P24385 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.48■□□□□ 0.39
CCND1P24385 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.47■□□□□ 0.39
CCND1P24385 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.47■□□□□ 0.39
CCND1P24385 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 AL645929.1-201ENST00000420084 975 ntBASIC17.47■□□□□ 0.39
CCND1P24385 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.47■□□□□ 0.39
CCND1P24385 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.47■□□□□ 0.39
CCND1P24385 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCND1P24385 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.47■□□□□ 0.39
CCND1P24385 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCND1P24385 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CCND1P24385 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCND1P24385 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCND1P24385 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CCND1P24385 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCND1P24385 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.46■□□□□ 0.39
CCND1P24385 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.46■□□□□ 0.39
CCND1P24385 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.46■□□□□ 0.39
CCND1P24385 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.46■□□□□ 0.39
CCND1P24385 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.46■□□□□ 0.39
CCND1P24385 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 AC004263.2-201ENST00000617183 678 ntBASIC17.46■□□□□ 0.39
CCND1P24385 AC009154.2-201ENST00000621177 724 ntBASIC17.46■□□□□ 0.39
CCND1P24385 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.46■□□□□ 0.39
CCND1P24385 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCND1P24385 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCND1P24385 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCND1P24385 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
CCND1P24385 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.46■□□□□ 0.38
CCND1P24385 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.46■□□□□ 0.38
CCND1P24385 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCND1P24385 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCND1P24385 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCND1P24385 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCND1P24385 AC133963.1-201ENST00000504166 1679 ntBASIC17.45■□□□□ 0.38
CCND1P24385 AC022188.1-201ENST00000620960 1664 ntBASIC17.45■□□□□ 0.38
CCND1P24385 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCND1P24385 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CCND1P24385 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms