Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.48■□□□□ 0.39
XPAP23025 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.48■□□□□ 0.39
XPAP23025 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.48■□□□□ 0.39
XPAP23025 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
XPAP23025 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 AC116407.3-201ENST00000623905 1129 ntBASIC17.48■□□□□ 0.39
XPAP23025 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.47■□□□□ 0.39
XPAP23025 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 AC134043.2-201ENST00000624206 2238 ntBASIC17.47■□□□□ 0.39
XPAP23025 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.47■□□□□ 0.39
XPAP23025 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.47■□□□□ 0.39
XPAP23025 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
XPAP23025 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.47■□□□□ 0.39
XPAP23025 AC243591.1-201ENST00000452967 1364 ntBASIC17.47■□□□□ 0.39
XPAP23025 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.47■□□□□ 0.39
XPAP23025 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
XPAP23025 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.47■□□□□ 0.39
XPAP23025 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XPAP23025 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.47■□□□□ 0.39
XPAP23025 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
XPAP23025 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.46■□□□□ 0.39
XPAP23025 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.46■□□□□ 0.39
XPAP23025 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.46■□□□□ 0.39
XPAP23025 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.46■□□□□ 0.39
XPAP23025 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.46■□□□□ 0.39
XPAP23025 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
XPAP23025 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.46■□□□□ 0.39
XPAP23025 AC005593.1-201ENST00000624894 515 ntBASIC17.46■□□□□ 0.39
XPAP23025 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.46■□□□□ 0.39
XPAP23025 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.46■□□□□ 0.39
XPAP23025 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
XPAP23025 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
XPAP23025 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.46■□□□□ 0.39
XPAP23025 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.46■□□□□ 0.38
XPAP23025 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
XPAP23025 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.45■□□□□ 0.38
XPAP23025 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 AC098831.1-202ENST00000438821 336 ntBASIC17.45■□□□□ 0.38
XPAP23025 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 AC136632.2-201ENST00000512891 861 ntBASIC17.45■□□□□ 0.38
XPAP23025 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms