Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NFKB1P19838 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.61■□□□□ 0.41
NFKB1P19838 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.61■□□□□ 0.41
NFKB1P19838 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.6■□□□□ 0.41
NFKB1P19838 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 AC009053.2-201ENST00000563701 2365 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.6■□□□□ 0.41
NFKB1P19838 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 KRT18P31-201ENST00000506277 1292 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.6■□□□□ 0.41
NFKB1P19838 PRELID1P1-202ENST00000567272 903 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
NFKB1P19838 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 AP005117.1-201ENST00000584346 1413 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 SIGLEC16-201ENST00000599858 1437 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NFKB1P19838 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 EGFEM1P-202ENST00000431685 1563 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 AC079776.2-201ENST00000641154 1609 ntBASIC17.6■□□□□ 0.41
NFKB1P19838 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NFKB1P19838 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NFKB1P19838 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.6■□□□□ 0.41
NFKB1P19838 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NFKB1P19838 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.59■□□□□ 0.41
NFKB1P19838 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.59■□□□□ 0.41
NFKB1P19838 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 AL121761.2-201ENST00000598007 1648 ntBASIC17.59■□□□□ 0.41
NFKB1P19838 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 AL121772.3-201ENST00000610840 674 ntBASIC17.59■□□□□ 0.41
NFKB1P19838 AC012313.10-201ENST00000623509 926 ntBASIC17.59■□□□□ 0.41
NFKB1P19838 AC073592.4-201ENST00000623827 446 ntBASIC17.59■□□□□ 0.41
NFKB1P19838 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NFKB1P19838 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.59■□□□□ 0.41
NFKB1P19838 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NFKB1P19838 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.59■□□□□ 0.41
NFKB1P19838 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
NFKB1P19838 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.58■□□□□ 0.41
NFKB1P19838 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.58■□□□□ 0.41
NFKB1P19838 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NFKB1P19838 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NFKB1P19838 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NFKB1P19838 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NFKB1P19838 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.58■□□□□ 0.4
NFKB1P19838 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.58■□□□□ 0.4
NFKB1P19838 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.58■□□□□ 0.4
NFKB1P19838 TSPY19P-201ENST00000418461 509 ntBASIC17.58■□□□□ 0.4
NFKB1P19838 TSPY18P-201ENST00000441642 509 ntBASIC17.58■□□□□ 0.4
NFKB1P19838 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.58■□□□□ 0.4
NFKB1P19838 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.58■□□□□ 0.4
NFKB1P19838 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.58■□□□□ 0.4
NFKB1P19838 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 AC004817.3-201ENST00000602957 2129 ntBASIC17.58■□□□□ 0.4
NFKB1P19838 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms