Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT4P19013 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT4P19013 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT4P19013 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
KRT4P19013 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT4P19013 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT4P19013 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
KRT4P19013 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT4P19013 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT4P19013 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
KRT4P19013 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT4P19013 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT4P19013 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT4P19013 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT4P19013 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT4P19013 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT4P19013 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT4P19013 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT4P19013 PCDHB17P-201ENST00000539533 2393 ntBASIC17.39■□□□□ 0.38
KRT4P19013 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT4P19013 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
KRT4P19013 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT4P19013 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT4P19013 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.39■□□□□ 0.37
KRT4P19013 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 TSPY15P-201ENST00000457163 923 ntBASIC17.39■□□□□ 0.37
KRT4P19013 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT4P19013 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT4P19013 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT4P19013 AC141257.4-201ENST00000634557 245 ntBASIC17.39■□□□□ 0.37
KRT4P19013 AC136944.6-201ENST00000634818 245 ntBASIC17.39■□□□□ 0.37
KRT4P19013 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KRT4P19013 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT4P19013 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT4P19013 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT4P19013 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT4P19013 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT4P19013 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT4P19013 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT4P19013 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.38■□□□□ 0.37
KRT4P19013 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 AL391005.1-201ENST00000623953 2435 ntBASIC17.38■□□□□ 0.37
KRT4P19013 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 MMP23A-201ENST00000234610 1017 ntBASIC17.38■□□□□ 0.37
KRT4P19013 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT4P19013 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 AC068472.1-201ENST00000474589 881 ntBASIC17.38■□□□□ 0.37
KRT4P19013 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT4P19013 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms