Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A2P16615 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATP2A2P16615 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A2P16615 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.12■□□□□ 0.65
ATP2A2P16615 AP000344.2-201ENST00000512987 629 ntBASIC19.12■□□□□ 0.65
ATP2A2P16615 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A2P16615 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A2P16615 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATP2A2P16615 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A2P16615 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 AC126763.1-201ENST00000552015 2118 ntBASIC19.12■□□□□ 0.65
ATP2A2P16615 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ATP2A2P16615 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP2A2P16615 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATP2A2P16615 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A2P16615 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2A2P16615 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 AC012313.1-201ENST00000593393 3059 ntBASIC19.11■□□□□ 0.65
ATP2A2P16615 AL139400.1-201ENST00000366220 510 ntBASIC19.11■□□□□ 0.65
ATP2A2P16615 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 IGLL3P-201ENST00000412472 434 ntBASIC19.11■□□□□ 0.65
ATP2A2P16615 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 AC004449.1-201ENST00000564240 433 ntBASIC19.11■□□□□ 0.65
ATP2A2P16615 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2A2P16615 AC004877.2-201ENST00000623941 599 ntBASIC19.11■□□□□ 0.65
ATP2A2P16615 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A2P16615 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A2P16615 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A2P16615 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.1■□□□□ 0.65
ATP2A2P16615 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2A2P16615 ACTG1P14-201ENST00000446382 1122 ntBASIC19.1■□□□□ 0.65
ATP2A2P16615 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATP2A2P16615 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2A2P16615 AC010654.1-201ENST00000615722 808 ntBASIC19.1■□□□□ 0.65
ATP2A2P16615 AC093512.1-201ENST00000617969 520 ntBASIC19.1■□□□□ 0.65
ATP2A2P16615 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATP2A2P16615 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A2P16615 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A2P16615 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A2P16615 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A2P16615 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A2P16615 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A2P16615 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A2P16615 BCAR1-209ENST00000546196 1340 ntBASIC19.09■□□□□ 0.65
ATP2A2P16615 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms