Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SIGLEC16-201ENST00000599858 1437 ntBASIC18.17■□□□□ 0.5
PDGFRAP16234 AC079776.2-201ENST00000641154 1609 ntBASIC18.17■□□□□ 0.5
PDGFRAP16234 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFRAP16234 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFRAP16234 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.17■□□□□ 0.5
PDGFRAP16234 AL121912.1-201ENST00000603683 238 ntBASIC18.17■□□□□ 0.5
PDGFRAP16234 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFRAP16234 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDGFRAP16234 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 SLC25A1P3-201ENST00000395415 828 ntBASIC18.16■□□□□ 0.5
PDGFRAP16234 RBM17P3-201ENST00000417687 1192 ntBASIC18.16■□□□□ 0.5
PDGFRAP16234 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.16■□□□□ 0.5
PDGFRAP16234 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.16■□□□□ 0.5
PDGFRAP16234 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 AC104692.2-201ENST00000603054 253 ntBASIC18.16■□□□□ 0.5
PDGFRAP16234 AC073592.4-201ENST00000623827 446 ntBASIC18.16■□□□□ 0.5
PDGFRAP16234 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFRAP16234 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDGFRAP16234 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFRAP16234 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
PDGFRAP16234 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDGFRAP16234 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFRAP16234 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFRAP16234 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.15■□□□□ 0.5
PDGFRAP16234 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDGFRAP16234 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.15■□□□□ 0.5
PDGFRAP16234 MTDHP3-201ENST00000594186 672 ntBASIC18.15■□□□□ 0.5
PDGFRAP16234 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 AC004817.3-201ENST00000602957 2129 ntBASIC18.15■□□□□ 0.5
PDGFRAP16234 AC008608.2-201ENST00000606089 416 ntBASIC18.15■□□□□ 0.5
PDGFRAP16234 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDGFRAP16234 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.15■□□□□ 0.5
PDGFRAP16234 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFRAP16234 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms