Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL135744.1-201ENST00000565098 629 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 SPDYE9P-201ENST00000570642 692 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 AC091167.2-201ENST00000579581 588 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 MIR3197-201ENST00000582241 73 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 SPDYE10P-202ENST00000612005 668 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 SPDYE8P-202ENST00000612377 668 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 AC084121.4-201ENST00000641598 221 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 AF228730.8-201ENST00000642140 221 ntBASIC18.92■□□□□ 0.62
HOXD8P13378 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HOXD8P13378 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXD8P13378 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXD8P13378 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
HOXD8P13378 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXD8P13378 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HOXD8P13378 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXD8P13378 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXD8P13378 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HOXD8P13378 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXD8P13378 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 HCG4-201ENST00000418983 998 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.91■□□□□ 0.62
HOXD8P13378 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 AL512356.2-201ENST00000546955 174 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 LINC01225-203ENST00000563550 1244 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 AC004449.1-201ENST00000564240 433 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.91■□□□□ 0.62
HOXD8P13378 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 AL161645.1-201ENST00000622716 1255 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 SLC22A20-204ENST00000530038 1673 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 TOP3BP1-201ENST00000420768 1380 ntBASIC18.91■□□□□ 0.62
HOXD8P13378 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXD8P13378 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HOXD8P13378 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXD8P13378 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HOXD8P13378 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 AC092474.2-201ENST00000424288 719 ntBASIC18.9■□□□□ 0.62
HOXD8P13378 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 AC069335.1-201ENST00000489972 472 ntBASIC18.9■□□□□ 0.62
HOXD8P13378 SPCS2P1-201ENST00000561636 679 ntBASIC18.9■□□□□ 0.62
HOXD8P13378 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXD8P13378 MIR3909-201ENST00000579518 119 ntBASIC18.9■□□□□ 0.62
HOXD8P13378 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXD8P13378 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXD8P13378 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXD8P13378 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXD8P13378 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXD8P13378 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HOXD8P13378 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 AC116353.5-201ENST00000638148 1699 ntBASIC18.89■□□□□ 0.61
HOXD8P13378 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXD8P13378 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD8P13378 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD8P13378 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms