Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.34■□□□□ 0.85
TOP1P11387 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TOP1P11387 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.33■□□□□ 0.85
TOP1P11387 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TOP1P11387 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TOP1P11387 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.33■□□□□ 0.85
TOP1P11387 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.33■□□□□ 0.85
TOP1P11387 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TOP1P11387 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TOP1P11387 LINC00982-205ENST00000420957 435 ntBASIC20.33■□□□□ 0.85
TOP1P11387 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.33■□□□□ 0.85
TOP1P11387 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.33■□□□□ 0.85
TOP1P11387 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.33■□□□□ 0.85
TOP1P11387 AC136632.2-201ENST00000512891 861 ntBASIC20.33■□□□□ 0.85
TOP1P11387 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.33■□□□□ 0.85
TOP1P11387 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.33■□□□□ 0.85
TOP1P11387 MIR1199-201ENST00000621445 119 ntBASIC20.33■□□□□ 0.85
TOP1P11387 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TOP1P11387 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TOP1P11387 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TOP1P11387 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
TOP1P11387 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.84
TOP1P11387 LYSMD4-203ENST00000378904 2122 ntBASIC20.33■□□□□ 0.84
TOP1P11387 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TOP1P11387 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TOP1P11387 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TOP1P11387 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.32■□□□□ 0.84
TOP1P11387 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.32■□□□□ 0.84
TOP1P11387 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TOP1P11387 PKD1P1-201ENST00000458669 6805 ntBASIC20.32■□□□□ 0.84
TOP1P11387 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TOP1P11387 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 ELK2BP-201ENST00000415014 1224 ntBASIC20.32■□□□□ 0.84
TOP1P11387 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.32■□□□□ 0.84
TOP1P11387 AC145285.3-201ENST00000564603 959 ntBASIC20.32■□□□□ 0.84
TOP1P11387 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TOP1P11387 AC117500.6-201ENST00000624871 588 ntBASIC20.32■□□□□ 0.84
TOP1P11387 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 AC006504.4-201ENST00000592118 1568 ntBASIC20.32■□□□□ 0.84
TOP1P11387 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 AL135999.2-201ENST00000622438 1686 ntBASIC20.32■□□□□ 0.84
TOP1P11387 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TOP1P11387 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOP1P11387 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TOP1P11387 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TOP1P11387 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.31■□□□□ 0.84
TOP1P11387 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.31■□□□□ 0.84
TOP1P11387 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.31■□□□□ 0.84
TOP1P11387 ACTG1P4-201ENST00000425123 1122 ntBASIC20.31■□□□□ 0.84
TOP1P11387 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.31■□□□□ 0.84
TOP1P11387 RNA5SP415-201ENST00000517246 115 ntBASIC20.31■□□□□ 0.84
TOP1P11387 AC106730.1-201ENST00000566722 1090 ntBASIC20.31■□□□□ 0.84
TOP1P11387 AL353135.1-201ENST00000606729 504 ntBASIC20.31■□□□□ 0.84
TOP1P11387 PGM5P2-202ENST00000637225 1043 ntBASIC20.31■□□□□ 0.84
TOP1P11387 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
TOP1P11387 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOP1P11387 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TOP1P11387 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TOP1P11387 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms