Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXC6P09630 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC6P09630 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC6P09630 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC6P09630 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXC6P09630 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXC6P09630 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC6P09630 KRT18P32-201ENST00000424695 1287 ntBASIC19.42■□□□□ 0.7
HOXC6P09630 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HOXC6P09630 INGX-202ENST00000489074 768 ntBASIC19.42■□□□□ 0.7
HOXC6P09630 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC6P09630 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC6P09630 AL135744.1-201ENST00000565098 629 ntBASIC19.42■□□□□ 0.7
HOXC6P09630 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC6P09630 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC6P09630 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
HOXC6P09630 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC6P09630 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC6P09630 AC244107.1-201ENST00000442033 332 ntBASIC19.41■□□□□ 0.7
HOXC6P09630 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC6P09630 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC6P09630 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
HOXC6P09630 AC084121.4-201ENST00000641598 221 ntBASIC19.41■□□□□ 0.7
HOXC6P09630 AF228730.8-201ENST00000642140 221 ntBASIC19.41■□□□□ 0.7
HOXC6P09630 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC6P09630 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC6P09630 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HOXC6P09630 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC6P09630 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC6P09630 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXC6P09630 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 BASP1P1-201ENST00000430708 665 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 LINC01225-203ENST00000563550 1244 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 AL161645.1-201ENST00000622716 1255 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 AF228730.6-201ENST00000641497 218 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 AC084121.3-201ENST00000641716 218 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 AC105233.6-201ENST00000642093 218 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXC6P09630 TUBB3P1-201ENST00000405796 1332 ntBASIC19.4■□□□□ 0.7
HOXC6P09630 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC6P09630 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC6P09630 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms