Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.71■□□□□ 0.11
HMGN1P05114 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
HMGN1P05114 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HMGN1P05114 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGN1P05114 ATP5G1P1-201ENST00000448724 379 ntBASIC15.71■□□□□ 0.11
HMGN1P05114 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.71■□□□□ 0.11
HMGN1P05114 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGN1P05114 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGN1P05114 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGN1P05114 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGN1P05114 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.71■□□□□ 0.1
HMGN1P05114 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HMGN1P05114 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGN1P05114 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HMGN1P05114 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 AL603756.1-201ENST00000606511 2163 ntBASIC15.7■□□□□ 0.1
HMGN1P05114 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGN1P05114 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HMGN1P05114 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HMGN1P05114 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGN1P05114 AL441883.1-201ENST00000566170 1045 ntBASIC15.7■□□□□ 0.1
HMGN1P05114 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HMGN1P05114 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HMGN1P05114 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HMGN1P05114 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 UBALD1-205ENST00000590891 2641 ntBASIC15.7■□□□□ 0.1
HMGN1P05114 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 AC092053.1-201ENST00000605787 1936 ntBASIC15.7■□□□□ 0.1
HMGN1P05114 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGN1P05114 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGN1P05114 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGN1P05114 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGN1P05114 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGN1P05114 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGN1P05114 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HMGN1P05114 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN1P05114 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN1P05114 SPDYE15P-201ENST00000424157 909 ntBASIC15.69■□□□□ 0.1
HMGN1P05114 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms