Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFAP04085 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFAP04085 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFAP04085 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PDGFAP04085 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PDGFAP04085 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 AL162727.3-201ENST00000635661 2787 ntBASIC16.2■□□□□ 0.18
PDGFAP04085 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.2■□□□□ 0.18
PDGFAP04085 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.2■□□□□ 0.18
PDGFAP04085 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PDGFAP04085 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 AL589182.2-201ENST00000619332 1049 ntBASIC16.2■□□□□ 0.18
PDGFAP04085 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 AC002310.6-201ENST00000624451 1377 ntBASIC16.2■□□□□ 0.18
PDGFAP04085 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFAP04085 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDGFAP04085 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFAP04085 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PDGFAP04085 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 WIZP1-201ENST00000531444 2299 ntBASIC16.19■□□□□ 0.18
PDGFAP04085 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
PDGFAP04085 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 CRYGEP-201ENST00000412192 528 ntBASIC16.19■□□□□ 0.18
PDGFAP04085 AC108073.2-201ENST00000464002 357 ntBASIC16.19■□□□□ 0.18
PDGFAP04085 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFAP04085 AC148477.5-201ENST00000625164 1645 ntBASIC16.19■□□□□ 0.18
PDGFAP04085 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFAP04085 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFAP04085 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDGFAP04085 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDGFAP04085 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDGFAP04085 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
PDGFAP04085 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.18■□□□□ 0.18
PDGFAP04085 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms