Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 AC046185.3-201ENST00000623228 1824 ntBASIC18.31■□□□□ 0.52
ZBED1O96006 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ZBED1O96006 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.31■□□□□ 0.52
ZBED1O96006 AL773604.1-201ENST00000617417 272 ntBASIC18.31■□□□□ 0.52
ZBED1O96006 AC148477.8-201ENST00000624298 468 ntBASIC18.31■□□□□ 0.52
ZBED1O96006 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.31■□□□□ 0.52
ZBED1O96006 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.3■□□□□ 0.52
ZBED1O96006 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.3■□□□□ 0.52
ZBED1O96006 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.3■□□□□ 0.52
ZBED1O96006 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.3■□□□□ 0.52
ZBED1O96006 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.3■□□□□ 0.52
ZBED1O96006 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.3■□□□□ 0.52
ZBED1O96006 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.3■□□□□ 0.52
ZBED1O96006 OR6D1P-203ENST00000641209 4860 ntBASIC18.3■□□□□ 0.52
ZBED1O96006 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZBED1O96006 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
ZBED1O96006 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
ZBED1O96006 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZBED1O96006 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZBED1O96006 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 HNRNPDP1-201ENST00000439535 754 ntBASIC18.29■□□□□ 0.52
ZBED1O96006 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.29■□□□□ 0.52
ZBED1O96006 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.29■□□□□ 0.52
ZBED1O96006 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 AL138688.1-201ENST00000624851 1594 ntBASIC18.29■□□□□ 0.52
ZBED1O96006 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.29■□□□□ 0.52
ZBED1O96006 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZBED1O96006 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
ZBED1O96006 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZBED1O96006 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms