Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
ABCA1O95477 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.51□□□□□ -0.09
ABCA1O95477 AL589182.2-201ENST00000619332 1049 ntBASIC14.51□□□□□ -0.09
ABCA1O95477 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 GMCL1P1-201ENST00000463439 1581 ntBASIC14.51□□□□□ -0.09
ABCA1O95477 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.51□□□□□ -0.09
ABCA1O95477 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ABCA1O95477 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ABCA1O95477 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCA1O95477 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA1O95477 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCA1O95477 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ABCA1O95477 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 KRT19P2-202ENST00000557173 1012 ntBASIC14.5□□□□□ -0.09
ABCA1O95477 AC239800.4-201ENST00000603712 296 ntBASIC14.5□□□□□ -0.09
ABCA1O95477 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 AD001527.2-201ENST00000622994 785 ntBASIC14.5□□□□□ -0.09
ABCA1O95477 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA1O95477 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA1O95477 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA1O95477 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms