Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.37■□□□□ 0.05
ALX3O95076 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.37■□□□□ 0.05
ALX3O95076 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.37■□□□□ 0.05
ALX3O95076 AC024563.2-201ENST00000603282 481 ntBASIC15.37■□□□□ 0.05
ALX3O95076 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.37■□□□□ 0.05
ALX3O95076 AL157888.1-201ENST00000631930 593 ntBASIC15.37■□□□□ 0.05
ALX3O95076 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
ALX3O95076 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.37■□□□□ 0.05
ALX3O95076 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ALX3O95076 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALX3O95076 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
ALX3O95076 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ALX3O95076 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.36■□□□□ 0.05
ALX3O95076 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
ALX3O95076 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
ALX3O95076 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.36■□□□□ 0.05
ALX3O95076 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALX3O95076 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
ALX3O95076 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.35■□□□□ 0.05
ALX3O95076 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 AC141257.4-201ENST00000634557 245 ntBASIC15.35■□□□□ 0.05
ALX3O95076 AC136944.6-201ENST00000634818 245 ntBASIC15.35■□□□□ 0.05
ALX3O95076 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 KRT18P22-201ENST00000402024 1347 ntBASIC15.35■□□□□ 0.05
ALX3O95076 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
ALX3O95076 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.35■□□□□ 0.05
ALX3O95076 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALX3O95076 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms