Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.55■□□□□ 0.4
USP1O94782 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.54■□□□□ 0.4
USP1O94782 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.54■□□□□ 0.4
USP1O94782 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.54■□□□□ 0.4
USP1O94782 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.54■□□□□ 0.4
USP1O94782 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.54■□□□□ 0.4
USP1O94782 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.54■□□□□ 0.4
USP1O94782 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.54■□□□□ 0.4
USP1O94782 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP1O94782 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.53■□□□□ 0.4
USP1O94782 FAM86EP-206ENST00000510506 987 ntBASIC17.53■□□□□ 0.4
USP1O94782 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 AC009533.2-201ENST00000543664 586 ntBASIC17.53■□□□□ 0.4
USP1O94782 AL121672.3-201ENST00000608644 468 ntBASIC17.53■□□□□ 0.4
USP1O94782 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
USP1O94782 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.53■□□□□ 0.4
USP1O94782 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.53■□□□□ 0.4
USP1O94782 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.53■□□□□ 0.4
USP1O94782 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP1O94782 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
USP1O94782 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
USP1O94782 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.52■□□□□ 0.4
USP1O94782 AL353593.2-201ENST00000602529 1483 ntBASIC17.52■□□□□ 0.4
USP1O94782 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
USP1O94782 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 CHCHD2P8-201ENST00000429873 447 ntBASIC17.52■□□□□ 0.4
USP1O94782 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms