Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KRT8P11-201ENST00000409686 1436 ntBASIC15.77■□□□□ 0.11
CLPXO76031 KRT8P50-201ENST00000562022 1438 ntBASIC15.77■□□□□ 0.11
CLPXO76031 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 AL109659.2-201ENST00000606809 1674 ntBASIC15.76■□□□□ 0.11
CLPXO76031 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CLPXO76031 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.76■□□□□ 0.11
CLPXO76031 FAM197Y1-201ENST00000421178 764 ntBASIC15.76■□□□□ 0.11
CLPXO76031 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.76■□□□□ 0.11
CLPXO76031 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.76■□□□□ 0.11
CLPXO76031 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CLPXO76031 AC026471.5-201ENST00000615068 467 ntBASIC15.76■□□□□ 0.11
CLPXO76031 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.76■□□□□ 0.11
CLPXO76031 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLPXO76031 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLPXO76031 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPXO76031 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLPXO76031 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLPXO76031 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
CLPXO76031 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.75■□□□□ 0.11
CLPXO76031 PRSS44-201ENST00000515154 1146 ntBASIC15.75■□□□□ 0.11
CLPXO76031 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLPXO76031 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CLPXO76031 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.75■□□□□ 0.11
CLPXO76031 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPXO76031 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPXO76031 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPXO76031 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPXO76031 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLPXO76031 REXO1L11P-201ENST00000620964 1927 ntBASIC15.74■□□□□ 0.11
CLPXO76031 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CLPXO76031 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPXO76031 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPXO76031 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPXO76031 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms