Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.08■□□□□ 0.01
UPK1BO75841 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.08■□□□□ 0.01
UPK1BO75841 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.08■□□□□ 0.01
UPK1BO75841 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
UPK1BO75841 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 POM121L13P-201ENST00000422362 380 ntBASIC15.08■□□□□ 0
UPK1BO75841 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.08■□□□□ 0
UPK1BO75841 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.08■□□□□ 0
UPK1BO75841 AC091390.4-202ENST00000476426 537 ntBASIC15.08■□□□□ 0
UPK1BO75841 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
UPK1BO75841 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1BO75841 AC104581.4-201ENST00000623126 3052 ntBASIC15.08■□□□□ 0
UPK1BO75841 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
UPK1BO75841 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
UPK1BO75841 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.07■□□□□ 0
UPK1BO75841 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.07■□□□□ 0
UPK1BO75841 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.07■□□□□ 0
UPK1BO75841 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 AC009065.1-201ENST00000564055 1225 ntBASIC15.07■□□□□ 0
UPK1BO75841 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 AL139327.4-201ENST00000612362 153 ntBASIC15.07■□□□□ 0
UPK1BO75841 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.07■□□□□ 0
UPK1BO75841 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UPK1BO75841 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.07■□□□□ 0
UPK1BO75841 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 ME2P1-201ENST00000426028 1970 ntBASIC15.07■□□□□ 0
UPK1BO75841 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.07■□□□□ 0
UPK1BO75841 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
UPK1BO75841 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1BO75841 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UPK1BO75841 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.06■□□□□ 0
UPK1BO75841 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.06■□□□□ 0
UPK1BO75841 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.06■□□□□ 0
UPK1BO75841 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 CICP4-201ENST00000447359 2812 ntBASIC15.06■□□□□ 0
UPK1BO75841 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.06■□□□□ 0
UPK1BO75841 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.06■□□□□ 0
UPK1BO75841 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 AC004264.1-201ENST00000608354 794 ntBASIC15.06■□□□□ 0
UPK1BO75841 AC092118.2-201ENST00000613495 667 ntBASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms