Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE3O75131 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE3O75131 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 AC009949.1-201ENST00000623048 1830 ntBASIC16.64■□□□□ 0.25
CPNE3O75131 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE3O75131 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE3O75131 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC092865.5-201ENST00000545435 363 ntBASIC16.64■□□□□ 0.25
CPNE3O75131 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE3O75131 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 AC140113.2-201ENST00000604370 208 ntBASIC16.64■□□□□ 0.25
CPNE3O75131 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE3O75131 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE3O75131 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE3O75131 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 AC132938.5-201ENST00000624980 1813 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPNE3O75131 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.63■□□□□ 0.25
CPNE3O75131 BX842568.4-201ENST00000421222 227 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 KRT18P27-201ENST00000427733 1299 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 AC136632.2-201ENST00000512891 861 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 IGHV3-52-201ENST00000519770 353 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 UNC93B6-202ENST00000528242 690 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.63■□□□□ 0.25
CPNE3O75131 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 AC019129.2-201ENST00000609837 1235 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE3O75131 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.63■□□□□ 0.25
CPNE3O75131 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPNE3O75131 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE3O75131 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE3O75131 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE3O75131 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms