Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HCN1O60741 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.22■□□□□ 0.19
HCN1O60741 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.22■□□□□ 0.19
HCN1O60741 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.22■□□□□ 0.19
HCN1O60741 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HCN1O60741 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.22■□□□□ 0.19
HCN1O60741 AL138831.2-201ENST00000606564 490 ntBASIC16.22■□□□□ 0.19
HCN1O60741 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 TP73-AS1-210ENST00000637775 1455 ntBASIC16.22■□□□□ 0.19
HCN1O60741 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.22■□□□□ 0.19
HCN1O60741 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCN1O60741 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HCN1O60741 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.21■□□□□ 0.19
HCN1O60741 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
HCN1O60741 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.21■□□□□ 0.19
HCN1O60741 AC079781.3-201ENST00000449110 356 ntBASIC16.21■□□□□ 0.19
HCN1O60741 AC112698.1-201ENST00000510299 916 ntBASIC16.21■□□□□ 0.19
HCN1O60741 AL662844.1-201ENST00000546340 181 ntBASIC16.21■□□□□ 0.19
HCN1O60741 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.21■□□□□ 0.19
HCN1O60741 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.21■□□□□ 0.19
HCN1O60741 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.21■□□□□ 0.19
HCN1O60741 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.21■□□□□ 0.19
HCN1O60741 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCN1O60741 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HCN1O60741 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCN1O60741 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 AC125634.1-201ENST00000438758 1403 ntBASIC16.2■□□□□ 0.18
HCN1O60741 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
HCN1O60741 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 AKR1C7P-201ENST00000305623 895 ntBASIC16.2■□□□□ 0.18
HCN1O60741 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HCN1O60741 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.2■□□□□ 0.18
HCN1O60741 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.2■□□□□ 0.18
HCN1O60741 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HCN1O60741 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.2■□□□□ 0.18
HCN1O60741 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HCN1O60741 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms