Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SSSCA1O60232 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 AC093525.9-201ENST00000624961 1746 ntBASIC14.16□□□□□ -0.14
SSSCA1O60232 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.16□□□□□ -0.14
SSSCA1O60232 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.16□□□□□ -0.14
SSSCA1O60232 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.16□□□□□ -0.14
SSSCA1O60232 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 AL139327.4-201ENST00000612362 153 ntBASIC14.16□□□□□ -0.14
SSSCA1O60232 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.16□□□□□ -0.14
SSSCA1O60232 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 NORAD-201ENST00000565493 5339 ntBASIC14.15□□□□□ -0.14
SSSCA1O60232 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SSSCA1O60232 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SSSCA1O60232 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.15□□□□□ -0.14
SSSCA1O60232 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
SSSCA1O60232 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 CYP2T1P-202ENST00000641596 2535 ntBASIC14.15□□□□□ -0.14
SSSCA1O60232 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SSSCA1O60232 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSSCA1O60232 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SSSCA1O60232 AC092338.2-201ENST00000568827 1415 ntBASIC14.15□□□□□ -0.14
SSSCA1O60232 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSSCA1O60232 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
SSSCA1O60232 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.15
SSSCA1O60232 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.15□□□□□ -0.15
SSSCA1O60232 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms