Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 CROCCP1-201ENST00000426910 5675 ntBASIC15.43■□□□□ 0.06
TRAF3IP2O43734 LINC02012-201ENST00000608206 1725 ntBASIC15.43■□□□□ 0.06
TRAF3IP2O43734 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAF3IP2O43734 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 AC080080.1-201ENST00000625121 2420 ntBASIC15.42■□□□□ 0.06
TRAF3IP2O43734 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 DUSP5P1-201ENST00000441325 1139 ntBASIC15.42■□□□□ 0.06
TRAF3IP2O43734 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 AL139288.1-201ENST00000623748 933 ntBASIC15.42■□□□□ 0.06
TRAF3IP2O43734 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAF3IP2O43734 EGFEM1P-202ENST00000431685 1563 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 ACTG1P4-201ENST00000425123 1122 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 SAPCD2P3-201ENST00000455031 850 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 FGFR3P6-201ENST00000457012 610 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 BX005266.1-201ENST00000473402 457 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 MTDHP3-201ENST00000594186 672 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms