Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 EGFEM1P-202ENST00000431685 1563 ntBASIC13.9□□□□□ -0.18
UPK2O00526 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UPK2O00526 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UPK2O00526 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK2O00526 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
UPK2O00526 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.9□□□□□ -0.19
UPK2O00526 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
UPK2O00526 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.9□□□□□ -0.19
UPK2O00526 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
UPK2O00526 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 AC009336.1-201ENST00000608941 1553 ntBASIC13.89□□□□□ -0.19
UPK2O00526 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 BX276092.5-203ENST00000456199 560 ntBASIC13.89□□□□□ -0.19
UPK2O00526 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.89□□□□□ -0.19
UPK2O00526 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
UPK2O00526 AL121672.3-201ENST00000608644 468 ntBASIC13.89□□□□□ -0.19
UPK2O00526 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK2O00526 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK2O00526 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
UPK2O00526 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK2O00526 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UPK2O00526 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
UPK2O00526 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CHCHD2P8-201ENST00000429873 447 ntBASIC13.88□□□□□ -0.19
UPK2O00526 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 AL121956.5-201ENST00000625261 221 ntBASIC13.88□□□□□ -0.19
UPK2O00526 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK2O00526 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms