Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.46■□□□□ 0.55
O00370 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 SIGLEC30P-201ENST00000455569 941 ntBASIC18.46■□□□□ 0.55
O00370 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.46■□□□□ 0.55
O00370 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.46■□□□□ 0.55
O00370 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 SART3-203ENST00000546611 1184 ntBASIC18.46■□□□□ 0.55
O00370 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
O00370 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
O00370 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.46■□□□□ 0.55
O00370 AL135999.2-201ENST00000622438 1686 ntBASIC18.46■□□□□ 0.55
O00370 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
O00370 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 AC016396.2-201ENST00000562575 1417 ntBASIC18.46■□□□□ 0.55
O00370 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
O00370 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
O00370 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
O00370 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
O00370 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.45■□□□□ 0.54
O00370 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.45■□□□□ 0.54
O00370 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.45■□□□□ 0.54
O00370 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
O00370 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
O00370 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
O00370 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
O00370 BX005266.1-201ENST00000473402 457 ntBASIC18.45■□□□□ 0.54
O00370 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.45■□□□□ 0.54
O00370 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.45■□□□□ 0.54
O00370 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.45■□□□□ 0.54
O00370 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.45■□□□□ 0.54
O00370 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
O00370 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
O00370 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
O00370 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.45■□□□□ 0.54
O00370 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.45■□□□□ 0.54
O00370 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
O00370 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
O00370 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.44■□□□□ 0.54
O00370 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
O00370 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
O00370 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.44■□□□□ 0.54
O00370 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.44■□□□□ 0.54
O00370 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.44■□□□□ 0.54
O00370 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
O00370 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
O00370 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
O00370 PRYP5-201ENST00000451909 266 ntBASIC18.44■□□□□ 0.54
O00370 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.44■□□□□ 0.54
O00370 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
O00370 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
O00370 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.44■□□□□ 0.54
O00370 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.44■□□□□ 0.54
O00370 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
O00370 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.44■□□□□ 0.54
O00370 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
O00370 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
O00370 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
O00370 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
O00370 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
O00370 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 SLC25A1P3-201ENST00000395415 828 ntBASIC18.43■□□□□ 0.54
O00370 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.43■□□□□ 0.54
O00370 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms