Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3B1O00203 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3B1O00203 PMPCAP1-201ENST00000508114 1576 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3B1O00203 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3B1O00203 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3B1O00203 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
AP3B1O00203 AC096582.2-201ENST00000510860 516 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.49■□□□□ 0.39
AP3B1O00203 AC012615.1-201ENST00000565797 1299 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.49■□□□□ 0.39
AP3B1O00203 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
AP3B1O00203 BNIP3P18-201ENST00000593976 575 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 AC069148.1-201ENST00000608741 768 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 AC091076.1-201ENST00000610741 619 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP3B1O00203 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 GPR89P-201ENST00000407924 1495 ntBASIC17.49■□□□□ 0.39
AP3B1O00203 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3B1O00203 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3B1O00203 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
AP3B1O00203 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP3B1O00203 AC060834.1-201ENST00000443027 2032 ntBASIC17.48■□□□□ 0.39
AP3B1O00203 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP3B1O00203 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3B1O00203 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP3B1O00203 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
AP3B1O00203 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3B1O00203 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
AP3B1O00203 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
AP3B1O00203 AL020989.1-201ENST00000422979 469 ntBASIC17.48■□□□□ 0.39
AP3B1O00203 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3B1O00203 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.48■□□□□ 0.39
AP3B1O00203 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3B1O00203 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 PCDHA12-202ENST00000613593 2588 ntBASIC17.48■□□□□ 0.39
AP3B1O00203 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3B1O00203 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP3B1O00203 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP3B1O00203 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3B1O00203 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
AP3B1O00203 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
AP3B1O00203 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3B1O00203 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 ACTG1P4-201ENST00000425123 1122 ntBASIC17.47■□□□□ 0.39
AP3B1O00203 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.47■□□□□ 0.39
AP3B1O00203 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.47■□□□□ 0.39
AP3B1O00203 AC074051.2-201ENST00000565115 352 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms