Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 NME9-203ENST00000383180 2133 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 AL359183.1-201ENST00000623796 2132 ntBASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PTBP1P-201ENST00000554374 1601 ntBASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AL359258.3-201ENST00000622910 2331 ntBASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AL138724.1-201ENST00000606771 1088 ntBASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AC093677.2-201ENST00000600169 1863 ntBASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC9.59□□□□□ -0.87
CHKB-CPT1BH3BT56 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.59□□□□□ -0.88
CHKB-CPT1BH3BT56 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
CHKB-CPT1BH3BT56 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms