Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AL135999.2-201ENST00000622438 1686 ntBASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AC132008.2-207ENST00000454517 770 ntBASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AL732292.2-201ENST00000609649 430 ntBASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AP000867.4-201ENST00000641616 219 ntBASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM6-TRIM34B2RNG4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ABCD1P5-201ENST00000445663 754 ntBASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AC148477.5-201ENST00000625164 1645 ntBASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM6-TRIM34B2RNG4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 NUS1P1-201ENST00000446295 882 ntBASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PRELID1P1-202ENST00000567272 903 ntBASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM6-TRIM34B2RNG4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms