Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 RNU1-129P-201ENST00000384064 167 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 MRPS18AP1-201ENST00000414458 589 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 MTRF1LP2-201ENST00000506027 1122 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 SERBP1P5-201ENST00000510079 1181 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 CR383656.12-201ENST00000549567 513 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 U1.21-201ENST00000580816 167 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 MIR4453-201ENST00000584019 89 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 AL138781.2-201ENST00000617896 1843 ntBASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PLEKHD1A6NEE1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 LINC00304-203ENST00000565008 1864 ntBASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 AC093503.3-201ENST00000624917 2352 ntBASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PLEKHD1A6NEE1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 MIR3909-201ENST00000579518 119 ntBASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 AL358472.5-202ENST00000641448 1267 ntBASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC26.33■■□□□ 1.81
PLEKHD1A6NEE1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
PLEKHD1A6NEE1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 SPDYE22P-201ENST00000582158 798 ntBASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 AC027307.3-201ENST00000594262 1100 ntBASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 AL031055.1-201ENST00000606362 631 ntBASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PLEKHD1A6NEE1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 MEIS3P1-201ENST00000495167 958 ntBASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 AC025048.6-201ENST00000634326 1161 ntBASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PLEKHD1A6NEE1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 AC090164.3-201ENST00000610780 2143 ntBASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PLEKHD1A6NEE1 PIN1P1-201ENST00000412108 996 ntBASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms