Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AL356309.3-201ENST00000624132 1934 ntBASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 HNRNPDP1-201ENST00000439535 754 ntBASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AC021087.4-201ENST00000563761 564 ntBASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AC243591.1-201ENST00000452967 1364 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AC046185.3-201ENST00000623228 1824 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AC103564.2-201ENST00000432853 1299 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 MIR7706-201ENST00000613747 67 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 FAM215A-202ENST00000632077 792 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AF228730.7-201ENST00000641842 219 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 AD000864.1-201ENST00000624076 2295 ntBASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPDC1A2A3K4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 SLC25A1P1-201ENST00000528351 927 ntBASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 STK25P1-201ENST00000585406 838 ntBASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPDC1A2A3K4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms