Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FAM197Y8-203ENST00000450145 560 ntBASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC112698.1-201ENST00000510299 916 ntBASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MRPL3P1-201ENST00000400109 1033 ntBASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DDX43P3-201ENST00000441064 443 ntBASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AF186996.4-201ENST00000467186 377 ntBASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SLC25A6P4-201ENST00000586535 553 ntBASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC084018.2-201ENST00000613093 2607 ntBASIC13.94□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms