Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 FLJ13224-201ENST00000313737 1514 ntBASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 RN7SL589P-201ENST00000481268 310 ntBASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 RNA5SP421-201ENST00000516864 134 ntBASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AC093520.2-201ENST00000561830 333 ntBASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AC239800.4-201ENST00000603712 296 ntBASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AC099522.2-201ENST00000607001 744 ntBASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC187A0A096LP49 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 CNN2P2-201ENST00000443536 909 ntBASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 CNN2P3-201ENST00000450201 906 ntBASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 MIR4745-201ENST00000577608 62 ntBASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AL136317.3-201ENST00000618497 906 ntBASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 Z92544.3-201ENST00000624747 417 ntBASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC187A0A096LP49 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms