Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 AL033527.4-201ENST00000641026 673 ntBASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 MIR6799-201ENST00000620297 69 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AC004408.2-201ENST00000623613 2777 ntBASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.87■□□□□ 0.93
ARFGEF1Q9Y6D6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 AP006294.1-201ENST00000415407 339 ntBASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 TEX28P1-201ENST00000613479 1221 ntBASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 TEX28P2-201ENST00000617764 1221 ntBASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 AC012569.1-201ENST00000591191 1524 ntBASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.86■□□□□ 0.93
ARFGEF1Q9Y6D6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 MIR346-201ENST00000362234 95 ntBASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 DGCR5-201ENST00000399539 862 ntBASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF1Q9Y6D6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms