Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA9Q9Y5G4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA9Q9Y5G4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 KRT18P28-201ENST00000453838 1332 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 ELK2BP-201ENST00000415014 1224 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 VN2R19P-201ENST00000442399 1052 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 SNHG9-202ENST00000564014 471 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AC008667.4-201ENST00000607370 168 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 C20orf181-201ENST00000623918 480 ntBASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA9Q9Y5G4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MKNK2P1-201ENST00000437526 628 ntBASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 AC108073.2-201ENST00000464002 357 ntBASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 IGHV3-65-201ENST00000523210 341 ntBASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 MIR4751-201ENST00000578027 74 ntBASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA9Q9Y5G4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AC006504.4-201ENST00000592118 1568 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms