Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 ALG1L8P-201ENST00000533887 760 ntBASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.65■■□□□ 1.06
RTCBQ9Y3I0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTCBQ9Y3I0 GNAS-203ENST00000306120 1878 ntBASIC21.64■■□□□ 1.06
RTCBQ9Y3I0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTCBQ9Y3I0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.64■■□□□ 1.06
RTCBQ9Y3I0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.64■■□□□ 1.05
RTCBQ9Y3I0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 AC092580.3-201ENST00000430932 139 ntBASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 WASH6P-202ENST00000359512 1437 ntBASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.63■■□□□ 1.05
RTCBQ9Y3I0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 AC027307.3-201ENST00000594262 1100 ntBASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 AL358472.5-202ENST00000641448 1267 ntBASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTCBQ9Y3I0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms