Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NINLQ9Y2I6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 MIR770-201ENST00000390219 98 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 AC254562.1-201ENST00000417586 456 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 ADH5P3-201ENST00000433842 1137 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 SPCS2P1-201ENST00000561636 679 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 AC091812.2-201ENST00000619081 385 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.52■■□□□ 1.36
NINLQ9Y2I6 AL645728.2-201ENST00000641974 660 ntBASIC23.52■■□□□ 1.36
NINLQ9Y2I6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
NINLQ9Y2I6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 AL645939.2-201ENST00000427340 991 ntBASIC23.51■■□□□ 1.35
NINLQ9Y2I6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 AL513480.1-201ENST00000451731 511 ntBASIC23.51■■□□□ 1.35
NINLQ9Y2I6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 AC005412.3-201ENST00000580309 715 ntBASIC23.51■■□□□ 1.35
NINLQ9Y2I6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NINLQ9Y2I6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 FAM58CP-201ENST00000435741 640 ntBASIC23.5■■□□□ 1.35
NINLQ9Y2I6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 DUX4L17-201ENST00000557360 1267 ntBASIC23.5■■□□□ 1.35
NINLQ9Y2I6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NINLQ9Y2I6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms