Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 LINC00628-201ENST00000628516 1289 ntBASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF2IRD1Q9UHL9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GTF2IRD1Q9UHL9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AL627223.1-201ENST00000416693 442 ntBASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AL671277.1-201ENST00000429656 993 ntBASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 FAM86C2P-203ENST00000528684 1004 ntBASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 AC009093.7-201ENST00000623853 1223 ntBASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF2IRD1Q9UHL9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 KRT8P48-201ENST00000515599 1220 ntBASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 LYSMD4-203ENST00000378904 2122 ntBASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GTF2IRD1Q9UHL9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms