Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNF216P1-203ENST00000404404 2427 ntBASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AC005104.2-201ENST00000427818 678 ntBASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AL353719.1-201ENST00000566847 864 ntBASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 AC078925.2-201ENST00000624013 1973 ntBASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CCM2LQ9NUG4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 KRT18P38-201ENST00000449496 1282 ntBASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCM2LQ9NUG4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCM2LQ9NUG4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 KRT8P47-201ENST00000604727 1398 ntBASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 AP003041.3-201ENST00000527151 707 ntBASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 AL136038.3-201ENST00000561909 1096 ntBASIC16.51■□□□□ 0.23
CCM2LQ9NUG4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms