Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 AC009078.2-202ENST00000463353 338 ntBASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRDM9Q9NQV7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 FDX1P1-201ENST00000449115 551 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AC018712.1-201ENST00000455767 687 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 SLC25A6P4-201ENST00000586535 553 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AL773604.1-201ENST00000617417 272 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AC005786.4-201ENST00000623369 682 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AC148477.5-201ENST00000625164 1645 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 AL135999.2-201ENST00000622438 1686 ntBASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRDM9Q9NQV7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 AC139713.2-201ENST00000641328 2723 ntBASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 AC004817.3-201ENST00000602957 2129 ntBASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 RPS2P28-201ENST00000314255 741 ntBASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 MRPL3P1-201ENST00000400109 1033 ntBASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 AC025062.2-201ENST00000605477 670 ntBASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms