Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 AC133963.1-201ENST00000504166 1679 ntBASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 AC132938.6-201ENST00000623828 1655 ntBASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 MIR4785-201ENST00000585005 73 ntBASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 AL121761.2-201ENST00000598007 1648 ntBASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AC007663.1-201ENST00000438948 1240 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 FITM1-202ENST00000559294 800 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AP000525.1-201ENST00000608286 694 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AC010653.2-201ENST00000623505 997 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 AL138688.1-201ENST00000624851 1594 ntBASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
C12orf4Q9NQ89 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C12orf4Q9NQ89 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms